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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015886542.1_cds_XP_016440683.1_36117
CDS Infomation

[gene=LOC107766417] [db_xref=GeneID:107766417] [protein=DNA replication ATP-dependent helicase/nuclease dna2-like isoform X2] [protein_id=XP_016440683.1] [location=join(18188..18739,19680..19847,19931..20164,20248..20310,20447..20809,20891..20944,21035..21096,21833..21965,22111..22221,22347..22443,22626..22708,23744..23809,24771..24926,25051..25106,25233..25290,25410..25520,26021..26077,27112..27246,27328..27582,28357..28431,29331..29452,29577..29589)] [gbkey=CDS]
Sequence

ATGGCTCCAAAGAAAAGAACAAGTTCAGGATCAGTGAAGAAATCAAGCAATCAAAACCAG
AACCTTCAGCATCAGCAGCAATCTCAGCCTTCCAAATTCGGGATCCAGCATTTCTTTGAA
CGCCACACCCAAAATGTCCTCTCTCAGAAATCCAAACCCCTCCTCGTTCCCCACAACTCC
AATTCCAACTCATTTCAAAACCCTAAAGAAAATTCCAGTGTATCAGTACCAGAAACTTCT
ACAAATAATGGATTGAATTCGAAGAAGTGTGACAAGGATAATGCGGTGTCTCGAGATAAA
GACCGTAGAAATGTGAATAAATCGGATCATATTGATGTAACGGAGAGATTTAAGGATAAG
GGAGTTGGGGATGGTAAAACTAAGGGAAAAAGAGTGACTTCGAAAAAGAATGAATTGGGT
GGTCCGTCTCAGAGTACACCTACGGAGAATGTGGTAACTGCAGGTTCAGTGGAGGATAAA
AATCAAGCAGAAACAACGCCTGAGTTTTGCAAGTCAGTGTCTGTGAAGCGCTTCAAGTTT
TCTCCAGGAATGCTGATCAAGCAAAGCCAGGATGATGGAGGTGATGAAGTAACATGGAGA
ATATCTCCAGTGAATGAACGACTTCATGCCGTGTCCAAACAGTTACCAGAGATGGTAAAG
GTGTTGGCGGATTCATCACGCTTCAACTCCTTAAGTATTCAAGAATGTTCGCTGAAAAAG
ACGTCTCCTGGGACAGAAAGAAAGTTTGAGAAGCGGCTTTGTTCACCTCCACTGAAGGCG
CTTGATAAATCATTAGTAAGCTCAAATAGGGCTAGCTTGAGAAACAGAAACAACGATCAT
GTAATGGATCTGTGGGAAACCAATGGAAACTTTAACTGCCAGAGCAAAACTGAAGTAACT
AACAGTCAGAGTCCTTTTCAAACTCCACCATCTTTGACATACGGCAGTGATAAGCCTGCC
AATGCGGTCAATAATAATGAAGTTACTGATCAGCTTGGTTCAAGGCAACACAAAAAGGCA
TTGATTGAGCTTTTAGACCAAGTAGAAGATGTTATCTCGGTTGAACCAAAATCTAAGGAG
AAAGTTGCCCATAGTCATGATGAACCAGCTAAGCCAGCTTCCATTGTGCTAGAAGATGTA
ATTTCTGTTATACCAAAATATGAGGAGAAAGTTGCATCCCATAGTCATGAAGAGCCAGCT
AGGCCAGCTGCCATTGTGCTAGAAGATGTCATTAATGTTGAACCAAAATGTGAGGAGAAA
GTTACATCCCATAGTCATGATGAACCAGCTAATCCAGCTGCCATTTTGCAGAAATCGGCA
GAAATATTTTGTGCACGTGACCAAAGGAAAGAGTCAACTATCTATTTTCTTGTATTGGAG
GTTTCTGAGAAGCATGGACAAGTTGAAACATCTGGACAGCAGTACTCCTTCAAGGTTTTG
CGCATACTGAATGAACAAAGTGGAGAAGAGCGGGTTTTGCAATTGAGAGATGAGTGGTGC
TATAGTGTTGTTGCACCAGGAGATACTATTCATGTCATTGGTGAGTTTGACAGCGAAGGA
AAATGTGAAATAGACCGTGAGAAGAATTTTCTCATTGTTCATCCAGATATTTTAGTCTCT
GGAACAAGGGTTGCTTCCAGTTTCAGTTGCTCAAGGCGAGCTGTGCTGGATGAGAGGTTA
AAATCTGGCGAGTATTCAGCTGCAGCATTGATTGGCACATTATTGCATCAGATGTTTCAG
GCTGGGCTGATCAGAGAGTCTCCTACACAAGAATTCTTGGAGGATTATGCAAGGATAGTG
CTCCAGAAAAGTCTTGAGAGCCTATATGCATGTGGAGTTGATGAAAATGATACTCACAAG
ACATTGATCGAGGCAATTCCAAAATTGCTGAATTGGATACGTTCCTTCCAATATTCGGAG
GTTTCAGAAGGCCCAAGTATTGATTTTGGAAGTGAAGATGGAGTTAAGAAGATTAAAGTA
TCTGAAGTACTTGATATTGAAGAAATGGCATGGGCCCCAAAATATGGGTTGAAAGGTATG
ATTGATGCATCCTTGCGAGTAAATGTAAAATTCAACACCAGTAAACATAATGAGATGATT
ATGCCTCTCGAATTTAAAACTGGGAAGGCAACAAATGGACAGACAGCTATGGAACATAAT
GCTCAAGTGATGCTGTATACCCTTCTTATGTCAGAAAGATACTCGCAGCATATTGGACAT
GGTCTCCTGTATTATCTGCATACAGATCAGACGCAGGGAATAACTGTTCGAAGATCTGAC
TTGGTTGGCCTAATAATGCGCCGTAATGAACTTGCAAATGATCTTCTCAAAACCACTATA
ACTCAACAACTGCCACCAATGTTACAGAGTCCAAATATGTGCAGAGCCTGTCGACACCTC
AATGTCTGTACCATTTATCATAAGGCATACGGTGGCAACACAGAAGGTAGCGGTTTGGGT
GGTGTTTTTGATTCACTTGTTAGCCATCTAACAAATGCACATACTAATTTTCTTCAAAAA
TGGGATCAGTTGATTGACTTGGAGGCTAAAGAAGTTGAGGTTGTAAAGAAAGAAATTTGG
AGTTCACAAAGTCCAAAGAATGACCTTTACGCTCCTTACTTATCTTCTCTTGTCCTTGAT
ACATCAGAACGAACCACACCAACAAAGTTTTGCAAAGGAAATCAATTTACTTATCACTTT
GTACATCGAGATTGGACTTCCTTGGGCACTCACCAACAGGATGGAGATGCTCTTAATAGT
TATAATTTTCCTATGAAAAAGTTTGAATCCTCACTTAGGAATGGGGATTATGTGATATTG
AGCACTGAACCTGGTGGTATACTAATAGCTACTGGAGTTGTTGTAGATATGAGTTGCTCT
CGCATCTCGGTATCTCTTTCCAAACGCTTAAGGCTTCCAGGTAGCAGCCGGACTTCACAG
GCACAAGATCTTCATCAGCAGTTGTGGCGAATCCATAAAGATGAGTTTATGGGTTCATTT
GCAATTATGAGAGTTCTCATCTGA

Peptide Sequence

PEP ID

XP_016440683.1
PEP Infomation

PREDICTED: DNA replication ATP-dependent helicase/nuclease dna2-like isoform X2 [Nicotiana tabacum]
Sequence

MAPKKRTSSGSVKKSSNQNQNLQHQQQSQPSKFGIQHFFERHTQNVLSQKSKPLLVPHNS
NSNSFQNPKENSSVSVPETSTNNGLNSKKCDKDNAVSRDKDRRNVNKSDHIDVTERFKDK
GVGDGKTKGKRVTSKKNELGGPSQSTPTENVVTAGSVEDKNQAETTPEFCKSVSVKRFKF
SPGMLIKQSQDDGGDEVTWRISPVNERLHAVSKQLPEMVKVLADSSRFNSLSIQECSLKK
TSPGTERKFEKRLCSPPLKALDKSLVSSNRASLRNRNNDHVMDLWETNGNFNCQSKTEVT
NSQSPFQTPPSLTYGSDKPANAVNNNEVTDQLGSRQHKKALIELLDQVEDVISVEPKSKE
KVAHSHDEPAKPASIVLEDVISVIPKYEEKVASHSHEEPARPAAIVLEDVINVEPKCEEK
VTSHSHDEPANPAAILQKSAEIFCARDQRKESTIYFLVLEVSEKHGQVETSGQQYSFKVL
RILNEQSGEERVLQLRDEWCYSVVAPGDTIHVIGEFDSEGKCEIDREKNFLIVHPDILVS
GTRVASSFSCSRRAVLDERLKSGEYSAAALIGTLLHQMFQAGLIRESPTQEFLEDYARIV
LQKSLESLYACGVDENDTHKTLIEAIPKLLNWIRSFQYSEVSEGPSIDFGSEDGVKKIKV
SEVLDIEEMAWAPKYGLKGMIDASLRVNVKFNTSKHNEMIMPLEFKTGKATNGQTAMEHN
AQVMLYTLLMSERYSQHIGHGLLYYLHTDQTQGITVRRSDLVGLIMRRNELANDLLKTTI
TQQLPPMLQSPNMCRACRHLNVCTIYHKAYGGNTEGSGLGGVFDSLVSHLTNAHTNFLQK
WDQLIDLEAKEVEVVKKEIWSSQSPKNDLYAPYLSSLVLDTSERTTPTKFCKGNQFTYHF
VHRDWTSLGTHQQDGDALNSYNFPMKKFESSLRNGDYVILSTEPGGILIATGVVVDMSCS
RISVSLSKRLRLPGSSRTSQAQDLHQQLWRIHKDEFMGSFAIMRVLI

Transcript Sequence

Gene sequence data has not been registered.